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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7396703_7398164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7396703 - 7398164

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAATACA

5'SS Class:

major

3'SS Sequence:

GTGTCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TGGTTCAGATCT

Flanking Amino Acid:

ASSVKVNLNEKFSAVDASSP

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.8

31.6

Major BPS

74.1

0.6

38.9

Major PPT

79.4

0.66

0.9

73.5

Minor 5ss

37.1

-1.5

2.8

43.5

37.7

Minor BPS

46.1

-0.2

1.9

66.35

43.9

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929