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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7398616_7399703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7398616 - 7399703

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTCTTTACCT

Flanking Amino Acid:

TAGERAPKSTGSTAASPTTP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.65

0.8

73.8

30.8

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

79.9

1.02

1.5

95.57

31.2

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929