Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_740405_740480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

740405 - 740480

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACGGC

5'SS Class:

major

3'SS Sequence:

TCTCCTCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GCAATGCTAACT

Flanking Amino Acid:

SWNNIVFQMKAGSADVGWTL

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

59.9

39.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

77.6

0.62

0.9

72.7

Minor 5ss

30.6

-2.2

3.4

41.1

45.6

Minor BPS

42.8

-0.4

2.3

58.65

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014204

739368 - 748342

8975