Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_743254_743993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

743254 - 743993

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGAC

5'SS Class:

major

3'SS Sequence:

TTTGTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

CGTATCCCACTC

Flanking Amino Acid:

INYLLESFTKYSPKAHTWVR

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

65.6

34.4

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

79.9

0.67

77.1

37.1

Minor 5ss

23.9

-3

3.3

31.3

43.2

Minor BPS

38.2

-0.9

1.9

44.16

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014204

739368 - 748342

8975