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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7458112_7458302_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7458112 - 7458302

Intron Length:
191

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGAGGA

5'SS Class:
strong_major

3'SS Sequence:
TGTCCTTCCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
GTGTATTCATCT

Flanking Amino Acid:
EAGGFTTNLEPVPLSDREVI

Intron Amino Acid Position:
287

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.5
0.84
0.8
71.2
34.5

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
79.2
0.66
0.8
77
31.7

Minor 5ss
24.3
-3
3.1
29.7
43.1

Minor BPS
46.8
-0.1
1.9
65.92
44.5

Associated Gene:

Gene:
EXOSC2

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7457110 - 7461396
4287