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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7459686_7459851_R


Intron Information:

Intron Rank:
5

Intron Class:
minor

Intron Phase:
0

Intron Coordinates:
7459686 - 7459851

Intron Length:
166

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTATCCTTG

5'SS Class:
strong_minor

3'SS Sequence:
CCGGCCCTGACAG|G

3'SS Class:
strong_BPS

U2 Branch Point Sequence:
CCTTGAC

U12 Branch Point Sequence:
GTTTCCTTGACC

Flanking Amino Acid:
DYLQEGDLISAEVQSVFSDG

Intron Amino Acid Position:
205

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
48.7
-0
1.3
46.2
44.5

Major BPS
61.6
0.29
1.1
54.6
40.8

Major PPT
59.3
0.21
1
52.9
36.8

Minor 5ss
88.7
1.3
1.2
81.9
38.3

Minor BPS
85.4
1.1
1
87.08
29.7

Associated Gene:

Gene:
EXOSC2

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7457110 - 7461396
4287