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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7461010_7461088_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7461010 - 7461088

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGGAGG

5'SS Class:
major

3'SS Sequence:
ACTCCCTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAG

U12 Branch Point Sequence:
ACTCCCTCCACA

Flanking Amino Acid:
DTITTDTGYMRGHGTYVDEE

Intron Amino Acid Position:
103

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1
60.4
45.8

Major BPS
63.4
0.33
1.6
73.6
41.8

Major PPT
72
0.5
0.8
64.9
30

Minor 5ss
24.8
-2.9
3.1
30.1
43.2

Minor BPS
49.6
-0
2
63.61
42.5

Associated Gene:

Gene:
EXOSC2

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7457110 - 7461396
4287