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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7504250_7506142_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7504250 - 7506142

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTTCCTTTTTT

Flanking Amino Acid:

GNQLGALVYQRAVITEEFKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

0.85

0.9

39.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

46.1

-0.2

3.6

79.54

Associated Gene:

Gene:

FUBP3

Ensembl Gene ID:

ENSAPLG00000011238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011815

7481474 - 7519393

37920

ENSAPLT00000033761

7482048 - 7519393

37346