Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_7583583_7583684_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7583583 - 7583684

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGCT

5'SS Class:

major

3'SS Sequence:

CTCGGTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

TCACACAGCACC

Flanking Amino Acid:

GLPGAELLIDGASLDDQAVY

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.6

37.6

Major BPS

55.5

0.14

64.3

32.4

Major PPT

67.6

0.4

57.2

43.3

Minor 5ss

33.7

-1.9

3.4

44.7

44.3

Minor BPS

38.3

-0.9

2.1

47.98

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022499

7578734 - 7590133

11400