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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7586321_7586477_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7586321 - 7586477

Intron Length:
157

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGCGGT

5'SS Class:
major

3'SS Sequence:
CAACTACTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTACAT

U12 Branch Point Sequence:
GTGTCCCCAACT

Flanking Amino Acid:
SSVTYTSVVPGLPQVNISSR

Intron Amino Acid Position:
418

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
63.5
42.9

Major BPS
65
0.37
1.3
75
40

Major PPT
69.4
0.44
1
58.8
41.5

Minor 5ss
33.1
-1.9
3.5
47.2
48.2

Minor BPS
58.2
0.34
1.9
78.29
43.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7578734 - 7590133
11400