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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7586742_7586818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7586742 - 7586818

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

CACGTCTAAATT

Flanking Amino Acid:

SIQPGERPLQGLPVSVVVNC

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

80.8

0.69

0.8

72.8

37.5

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

48.1

-0

1.8

59.43

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022499

7578734 - 7590133

11400