Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_7634046_7641374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7634046 - 7641374

Intron Length:

7329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCTA

5'SS Class:

major

3'SS Sequence:

GTTCTTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTAATT

Flanking Amino Acid:

FWKWGSVLTNAAINLAKLKL

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

66.8

40.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.65

75.8

38.2

Minor 5ss

36.1

-1.6

3.2

44.3

44.6

Minor BPS

66.8

0.61

89.07

35.8

Associated Gene:

Gene:

GPR107

Ensembl Gene ID:

ENSAPLG00000009595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026341

7624092 - 7657654

33563

ENSAPLT00000010062

7628946 - 7657654

28709