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Intron Name: Anas_platyrhynchos_platyrhynchos_18_765829_766398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

765829 - 766398

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

GTTTGTTCCACC

Flanking Amino Acid:

IQERVAQGWKGSCLFFGCRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

0.5

1.1

71.2

35.2

Major PPT

78.9

0.65

0.8

73.1

31.8

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

45.6

-0.3

2.3

62.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021927

765720 - 771236

5517