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Intron Name: Anas_platyrhynchos_platyrhynchos_18_769238_770212_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

769238 - 770212

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCACGAGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTTTCCTCACGA

Flanking Amino Acid:

TSRSAHVYLAGNFPVPCRVR

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

53.3

0.07

1.1

47.4

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

49.5

-0

2.1

67.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021927

765720 - 771236

5517