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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7737349_7740953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7737349 - 7740953

Intron Length:

3605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCAATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TTTTCCCCCATT

Flanking Amino Acid:

SLKRGLSLKLGAGPEDFSNL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

73.3

37.4

Major BPS

79.2

0.72

Major PPT

76.6

0.6

0.9

35.1

Minor 5ss

39.8

-1.1

2.8

42.5

Minor BPS

49.9

0.08

2.3

81.02

40.9

Associated Gene:

Gene:

FNBP1

Ensembl Gene ID:

ENSAPLG00000009326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026274

7690145 - 7752794

62650

ENSAPLT00000009735

7662569 - 7751665

89097

ENSAPLT00000045082

7686194 - 7751665

65472