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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7768945_7769426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7768945 - 7769426

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTCTCTTGATC

Flanking Amino Acid:

WIAFIMEYIRRFVVSCIPSW

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

73.6

31.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

42.1

-0.9

2.6

53.2

44.1

Minor BPS

72.3

0.68

1.1

78.62

30.2

Associated Gene:

Gene:

USP20

Ensembl Gene ID:

ENSAPLG00000008760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009150

7761070 - 7778318

17249