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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7776188_7776765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7776188 - 7776765

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTCTG

5'SS Class:

major

3'SS Sequence:

GTCTTTAATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTGTCTTTAATC

Flanking Amino Acid:

QSPPVKFTEPDSPLPAHPLK

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

46.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

70.6

0.46

63.4

Minor 5ss

31.5

-2.1

3.2

45.3

Minor BPS

73.7

0.72

1.2

73.46

38.5

Associated Gene:

Gene:

USP20

Ensembl Gene ID:

ENSAPLG00000008760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009150

7761070 - 7778318

17249