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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7777103_7777815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7777103 - 7777815

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCACCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGTAC

U12 Branch Point Sequence:

TTTCTCTCACCA

Flanking Amino Acid:

VGPNLWACLQLGCSYVGCGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

46.1

-0.2

1.3

43.1

39.2

Major PPT

80.7

0.69

0.8

74.8

34.8

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

55.8

0.18

1.8

72.76

39.1

Associated Gene:

Gene:

USP20

Ensembl Gene ID:

ENSAPLG00000008760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009150

7761070 - 7778318

17249