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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7782885_7783562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7782885 - 7783562

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTGATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATT

Flanking Amino Acid:

QSLRKRPNGVSAVALLVGEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.2

0.3

38.3

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

C9orf78

Ensembl Gene ID:

ENSAPLG00000008571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008935

7781924 - 7786802

4879