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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7783615_7783813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7783615 - 7783813

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTTAAAT

Flanking Amino Acid:

EKLQEEATLVDDPFKIKSGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.9

0.61

0.9

67.2

42.5

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

84.8

1.17

1.1

97.05

26.9

Associated Gene:

Gene:

C9orf78

Ensembl Gene ID:

ENSAPLG00000008571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008935

7781924 - 7786802

4879