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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7784808_7785187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7784808 - 7785187

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTACGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAT

Flanking Amino Acid:

SGIPEVDLGIDAKIKNIIST

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.1

63.6

43.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.6

0.87

0.6

Minor 5ss

42.1

-0.9

3.1

44.4

Minor BPS

72.8

0.79

1.3

84.4

36.4

Associated Gene:

Gene:

C9orf78

Ensembl Gene ID:

ENSAPLG00000008571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008935

7781924 - 7786802

4879