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Intron Name: Anas_platyrhynchos_platyrhynchos_18_78189_78530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78189 - 78530

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGGT

5'SS Class:

major

3'SS Sequence:

TCCATCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTTCTGATAG

Flanking Amino Acid:

FLLQLFEHDKDLKVVNSYLK

Intron Amino Acid Position:

1871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

61.3

43.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.2

0.55

0.8

68.1

32.1

Minor 5ss

29.2

-2.4

3.8

46.9

48.5

Minor BPS

48.3

-0.2

1.9

58.2

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439

ENSAPLT00000036122

70053 - 112105

42053

ENSAPLT00000025674

72667 - 112105

39439