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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7842269_7842535_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7842269 - 7842535

Intron Length:
267

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACGGGA

5'SS Class:
major

3'SS Sequence:
TGTGCATCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGCAT

U12 Branch Point Sequence:
TCTCTGTGCATC

Flanking Amino Acid:
QDAARRSELESPACLGSDRS

Intron Amino Acid Position:
38

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.2
64
42.4

Major BPS
59.8
0.25
1.5
71.4
45.1

Major PPT
68.8
0.42
0.9
58.9
42

Minor 5ss
34.1
-1.8
3.6
47.1
48.3

Minor BPS
39.4
-0.8
2.3
51.51
40.2

Associated Gene:

Gene:
ASB6

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7841333 - 7845693
4361

7841333 - 7845693
4361