Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_7847169_7847493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7847169 - 7847493

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

GCTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

CACCCGCTAACC

Flanking Amino Acid:

YDVIWIQWVIGHLTDNHLSD

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

64.2

41.9

Major BPS

55.5

0.14

64.3

32.4

Major PPT

68.3

0.41

0.8

58.1

33.1

Minor 5ss

-2.8

3.5

38.1

46.8

Minor BPS

-0.4

2.3

53.58

43.8

Associated Gene:

Gene:

NTMT1

Ensembl Gene ID:

ENSAPLG00000008022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008318

7846912 - 7848834

1923