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Intron Name: Anas_platyrhynchos_platyrhynchos_18_78679_78961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78679 - 78961

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

CTTGCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CTCATGTGCACT

Flanking Amino Acid:

PAVLSLFLLYGWSITPIMYP

Intron Amino Acid Position:

1821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.3

44.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

74.5

0.55

0.8

65.6

36.1

Minor 5ss

45.2

-0.5

2.5

49.2

47.1

Minor BPS

-0.7

2.4

56.3

46.2

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036122

70053 - 112105

42053

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439