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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8009439_8009938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8009439 - 8009938

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCCTTCTATACA

Flanking Amino Acid:

TQAHREYTDMAIRGNAIDRH

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

0.85

0.9

39.9

Major PPT

0.7

0.8

76.1

31.5

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

49.2

-0

62.04

44.4

Associated Gene:

Gene:

CRAT

Ensembl Gene ID:

ENSAPLG00000007161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007450

7999531 - 8010833

11303