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Intron Name: Anas_platyrhynchos_platyrhynchos_18_80147_80492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80147 - 80492

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CTTCCCACCACT

Flanking Amino Acid:

RKIAVRRTAQVFYNNKGYHS

Intron Amino Acid Position:

1667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

0.65

0.8

69.8

36.7

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

46.3

-0.2

2.2

70.85

45.5

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439

ENSAPLT00000036122

70053 - 112105

42053