Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8045391_8046020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8045391 - 8046020

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGA

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTTCATATCT

Flanking Amino Acid:

PVFVYTTFGQSVFSQLRLSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.1

41.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

74.4

0.55

1.1

74.5

39.3

Minor 5ss

34.4

-1.8

3.5

47.2

48.2

Minor BPS

58.8

0.35

1.9

80.25

41.8

Associated Gene:

Gene:

MIGA2

Ensembl Gene ID:

ENSAPLG00000006834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007117

8034719 - 8046116

11398