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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8078066_8078728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8078066 - 8078728

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CAGATCTTAATG

Flanking Amino Acid:

LLLTLARTQQGAAAVAGAGV

Intron Amino Acid Position:

1321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

82.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.5

0.6

0.9

69.4

36.8

Minor 5ss

34.2

-1.8

3.2

46.6

48.7

Minor BPS

55.7

0.04

1.5

52.44

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005924

8073279 - 8099964

26686