Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8081806_8082331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8081806 - 8082331

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

TTGTGGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

ATCTCTGTATCT

Flanking Amino Acid:

RMLLIISTSHADIMHLTDSA

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

72.5

37.3

Major BPS

0.47

1.2

61.1

45.5

Major PPT

71.6

0.49

0.9

69.4

41.7

Minor 5ss

34.5

-1.8

3.5

48.1

Minor BPS

49.6

0.05

2.2

73.56

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005924

8073279 - 8099964

26686