Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8087110_8087235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8087110 - 8087235

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

ATGTGATGATGT

Flanking Amino Acid:

NLFPEMDPGSSSAPSLQSLC

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

77.7

0.62

0.9

69.5

41.7

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

37.6

-0.8

2.3

56.19

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005924

8073279 - 8099964

26686