Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8092842_8093348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8092842 - 8093348

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCAG

5'SS Class:

major

3'SS Sequence:

TGTCTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

AGGATCTCACTT

Flanking Amino Acid:

KLANNSHIHQEMDSQLLQLG

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

62.1

44.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

77.9

0.63

0.9

37.3

Minor 5ss

36.6

-1.5

3.1

46.7

48.6

Minor BPS

44.2

-0.3

1.7

55.56

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005924

8073279 - 8099964

26686