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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8110939_8111130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8110939 - 8111130

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTGTTTTAACA

Flanking Amino Acid:

KQITHSPKVQELGRKLGLER

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.2

0.77

0.9

35.4

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

75.7

0.8

1.2

82.25

33.1

Associated Gene:

Gene:

PHYHD1

Ensembl Gene ID:

ENSAPLG00000028351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046414

8110813 - 8113903

3091