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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8112586_8112702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8112586 - 8112702

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

GCCACATTAAAT

Flanking Amino Acid:

FFEKGVLDERGNFLIPKERS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

73.5

0.58

79.3

29.4

Major PPT

81.4

0.71

0.8

77.5

31.3

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

49.8

0.06

1.8

64.19

45.3

Associated Gene:

Gene:

PHYHD1

Ensembl Gene ID:

ENSAPLG00000028351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046414

8110813 - 8113903

3091