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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8112779_8113022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8112779 - 8113022

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCAA

5'SS Class:

major

3'SS Sequence:

TTATCCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTGTCTTTACTG

Flanking Amino Acid:

TKEGEQLQAQGSSDYFLTSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

56.2

44.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

73.7

0.53

70.1

36.2

Minor 5ss

41.7

-0.9

3.2

56.2

Minor BPS

55.2

0.03

1.7

58.09

44.8

Associated Gene:

Gene:

PHYHD1

Ensembl Gene ID:

ENSAPLG00000028351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046414

8110813 - 8113903

3091