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Intron Name: Anas_platyrhynchos_platyrhynchos_18_813431_815965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

813431 - 815965

Intron Length:

2535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGTTTTAAAAAT

Flanking Amino Acid:

FKRRRSSKDTPCRMVPQECQ

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.4

39.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.8

0.74

0.8

77.1

31.6

Minor 5ss

30.3

-2.3

3.3

39.1

46.1

Minor BPS

45.5

-0.2

1.9

64.8

39.5

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046