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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8147477_8147599_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8147477 - 8147599

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGGGTCAG

5'SS Class:

weak_major

3'SS Sequence:

AAAGCTCCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTAGAA

U12 Branch Point Sequence:

TCTCTCTAGAAA

Flanking Amino Acid:

TPVFIPLRPVNGKLMSSADW

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.1

49.5

43.1

Major BPS

57.4

0.18

1.1

54.9

40.8

Major PPT

47.9

-0.1

1.1

43.1

36.7

Minor 5ss

-2.5

27.7

37.5

Minor BPS

47.9

-0.1

1.8

60.16

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005416

8145358 - 8150287

4930