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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8157502_8158065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8157502 - 8158065

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTTAT

U12 Branch Point Sequence:

TTTATGTCCACT

Flanking Amino Acid:

TFYLSNVAPQVPHLNKNAWN

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

0.47

1.2

61.1

45.5

Major PPT

83.3

0.75

0.9

80.3

37.3

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

-0.3

2.5

72.3

44.6

Associated Gene:

Gene:

ENDOG

Ensembl Gene ID:

ENSAPLG00000004952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005103

8156477 - 8158581

2105