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Intron Name: Anas_platyrhynchos_platyrhynchos_18_817128_818765_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

817128 - 818765

Intron Length:

1638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCCGCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ATGTCCGCAAAA

Flanking Amino Acid:

AVNVWRKNLQRELRRRSKCI

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

50.3

0.01

1.1

50.1

37.9

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

47.3

-0.2

2.3

63.46

42.6

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046