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Intron Name: Anas_platyrhynchos_platyrhynchos_18_817529_818765_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

817529 - 818765

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCAAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATTATTATTT

Flanking Amino Acid:

AVNVWRKNLQQQHRRG*

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

55.9

0.13

1.1

57.5

36.9

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

56.7

0.29

1.8

77.56

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013240

817441 - 836204

18764