Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8185543_8185895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8185543 - 8185895

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

TGTTCTGGAACC

Flanking Amino Acid:

LMTSQFISVFSNLLESKADG

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

82.6

0.73

0.9

80.4

31.6

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

0.11

2.1

71.92

39.2

Associated Gene:

Gene:

ZER1

Ensembl Gene ID:

ENSAPLG00000012789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013330

8175032 - 8188785

13754