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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8214505_8214823_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

8214505 - 8214823

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATCCCTG

5'SS Class:

weak_minor

3'SS Sequence:

CTCCTTTGTCCAG|A

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AAGATTATAATC

Flanking Amino Acid:

KSLSRTRVGLDEVLAVLKVD

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

47.1

48.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.7

0.65

0.9

71.8

38.1

Minor 5ss

59.4

0.32

2.4

64.9

46.5

Minor BPS

46.6

-0.2

1.5

50.97

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013673

8203531 - 8218620

15090