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Intron Name: Anas_platyrhynchos_platyrhynchos_18_82445_84284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82445 - 84284

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTAAT

5'SS Class:

major

3'SS Sequence:

CTTGTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAC

U12 Branch Point Sequence:

CTTGTTTCCACA

Flanking Amino Acid:

HQDPDNISLQGDLPPLILSP

Intron Amino Acid Position:

1480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

80.8

32.8

Major BPS

48.9

-0

0.9

54.6

27.1

Major PPT

81.1

0.7

0.8

75.9

32.8

Minor 5ss

39.8

-1.1

2.5

51.4

45.2

Minor BPS

-0.4

42.5

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036122

70053 - 112105

42053