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Intron Name: Anas_platyrhynchos_platyrhynchos_18_825115_825720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

825115 - 825720

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

GCTTCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGACAC

U12 Branch Point Sequence:

GACAAGTGGACA

Flanking Amino Acid:

QGYQMSTKLKIVTIHQEPFV

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

-0.1

1.3

52.4

43.3

Major PPT

77.1

0.61

0.8

30.9

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

37.6

-0.9

2.1

42.67

38.1

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046

ENSAPLT00000013240

817441 - 836204

18764