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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8258388_8259061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8258388 - 8259061

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CCGTCTCCACCT

Flanking Amino Acid:

PYVTKEELYQNLTREQADYC

Intron Amino Acid Position:

2393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

35.1

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

87.2

0.84

0.7

84.6

30.3

Minor 5ss

35.9

-1.6

2.9

46.6

41.7

Minor BPS

42.1

-0.5

55.95

46.6

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568