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Intron Name: Anas_platyrhynchos_platyrhynchos_18_826043_827558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

826043 - 827558

Intron Length:

1516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATTGG

5'SS Class:

major

3'SS Sequence:

TTTCTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCACAG

U12 Branch Point Sequence:

TTTCTCTTCACA

Flanking Amino Acid:

NIWKTGPLFKRVLMSSKYSE

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

64.7

41.9

Major BPS

-0.4

1.4

48.6

36.6

Major PPT

0.86

0.6

83.6

24.7

Minor 5ss

-0.5

2.6

58.3

46.4

Minor BPS

67.6

0.55

1.7

80.35

35.4

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046

ENSAPLT00000013240

817441 - 836204

18764