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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8265384_8265583_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8265384 - 8265583

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

CCTGTTTGAAAT

Flanking Amino Acid:

TWRNLQKIIKERELELQKEQ

Intron Amino Acid Position:

2152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.7

91.8

25.6

Major BPS

0.45

57.8

Major PPT

82.3

0.73

0.8

80.3

31.6

Minor 5ss

29.8

-2.3

4.1

49.5

46.7

Minor BPS

47.5

-0.1

1.6

60.71

43.5

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568