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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8273130_8273274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8273130 - 8273274

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TAATTGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTGTATTTAATT

Flanking Amino Acid:

IANRRNEVLDRWLRLKAQMI

Intron Amino Acid Position:

1493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

75.3

40.8

Major BPS

100

1.24

0.5

100

Major PPT

76.6

0.6

69.3

41.3

Minor 5ss

31.5

-2.1

2.4

35.1

40.7

Minor BPS

66.1

0.58

1.5

77.43

39.4

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568