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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8277243_8278371_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8277243 - 8278371

Intron Length:

1129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCACTTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TGTTTCTTCACT

Flanking Amino Acid:

AEEVQAVEQQDETDSKTASP

Intron Amino Acid Position:

1156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.4

63.2

43.9

Major BPS

0.79

0.8

83.7

25.7

Major PPT

76.8

0.6

0.9

74.1

34.5

Minor 5ss

43.5

-0.7

3.3

65.1

46.1

Minor BPS

72.3

0.78

1.7

88.23

36.9

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568