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Intron Name: Anas_platyrhynchos_platyrhynchos_18_828308_828841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

828308 - 828841

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATTG

Flanking Amino Acid:

LEARVIILSASEDDAATVYR

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.3

0.75

0.8

77.5

29.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

49.4

-0.1

1.9

58.64

43.9

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046

ENSAPLT00000013240

817441 - 836204

18764